Immigration checks in transit from CDG and MUC (DEL-CDG/MUC-GVA)

I am an Indian national with a valid D visa issued by Switzerland. I am planning to book tickets with either Air France (DEL - CDG - GVA) or Lufthansa (DEL - MUC GVA). I was wondering where the immigration checks will be for me. I know one of them will be in Delhi, as the first station of the journey.

But will I have to also go through an immigration check-in CDG (or MUC)? The layover time is 3.25 hours for CDG (1.25 hours for MUC). Is that plenty of time?

I am flying internationally for the first time, so I apologise if the questions sound trivial!